Download Autodock Tools Workvina --config config.txt --out out.pdbqt --log log.txt Or inline: receptor = receptor.pdbqt ligand = ligand.pdbqt center_x = 0 center_y = 0 center_z = 0 size_x = 20 size_y = 20 size_z = 20 exhaustiveness = 8 Adjust center/size to cover binding site (use ADT grid tool to find center and box dimensions). Command: download autodock tools work |
   
AFS-design -film -sim -flug -aero 
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